This freeware program visualizes pathways (KEGG, GenMAPP, BioCarta...). The user has the possibility to display any kind of quantitative data from gene and protein experiments (e.g. microarrays from Affymetrix) directly within the pathways (colors represent the value). The linking between the pathway items and the experiment data is done over the gene or protein names and their accession numbers. Furthermore, the user has a quick overview on the gene/protein with the collected links in the web-interface (direct links).
This program includes only a small part of the functions from the software GENOM 2005.

Table view

APP presents the data in different colors for each signal, so you have a quick overview of the data.
Gene Data Table
Advanced Pathway Painter - BioCarta Pathway

Pathways with gene expressions

This screenshot shows a loaded pathway which is directly combined with the data you have loaded.

Gene details

In this screenshot, you can directly access the links for more information about your query. Unlike in other programs you can click on a link and directly access the result page without filling out web forms.
Gene Browser
Pathway Update

Update pathways

Easy updates of pathways from the internet without time intensive search.