Feature rich and user friendly application for analysing array-experiments (e.g. from provider Affymetrix). It includes additional gene information, multiple analysis methods, automatic pathway mapping with an editor, function prediction...
You can display each signal on your array in a 3D view. When comparing it with another array, you can easily find interesting probesets. You can also sort the signals by gene function or gene location.
This view displays all probesets orders by their location on the chromosome.
With this integrated map editor, you can easily create new pathways or edit an existing one.
Gene Function Prediction
Often you have no information about a probeset because it's an EST or it has not been analyzed before. With this module you can get new information from probesets or custom sequences over a BLAST search (online). Possible new gene functions will then be shown.
The gene information dialog. Here you get more detail information from the searched query like sequence, description and more.
In this screenshot, you can directly access the links for more information about your query. Unlike in other programs you can click on a link and directly access the result page without filling out web forms.